decompress: Wrapper function for gunzip, bunzip

In kathrynrozengagnon/CLIPflexR: CLIP tools and wrappers in R

Wrapper function for gunzip, bunzip

Description

Wrapper function for gunzip, bunzip

Usage

decompress(
  fileToDecompress,
  outDir = file_path_sans_ext(fileToDecompress),
  keep = TRUE,
  overwrite = FALSE
)

Arguments

fileToDecompress	path to file to decompress.
outDir	output directory.
keep	keep (don't delete) input files, TRUE (default) or FALSE.
overwrite	overwrite existing output files, TRUE or FALSE (default).

Value

path to unzipped file.

Author(s)

Kathryn Rozen-Gagnon

Examples

 
testFQ <- system.file("extdata/Fox3_Std_small.fq.gz",package="CLIPflexR")
decompress(testFQ,overwrite=TRUE)

kathrynrozengagnon/CLIPflexR documentation built on Dec. 8, 2022, 7:31 p.m.