geoNIFTI: class for loading and presenting NIFTI data

In kbolab/moddicom: Package for handling DICOM RT files

Description

Instantiate an object of the class geoNIFTI.This represents just the classname, methods are exposed with the technique of 'closure'. In order to see manuals for the single mathods, consider the vignette or use the available for the following wrapping functions:

• GLT.getImageVoxelCube( ); : to get the ImageVoxelCube stored into a geoNIFTI object

• GLT.getROIVoxels( ); : to get the IMAGE Voxels geometrically located into a ROI, for a given geoNIFTI object

The original methods for the class geoLet can also be invocked using the same name without the previx 'GTL.', i.e.:

Usage

geoNIFTI()

Examples

## Not run: 
# first of all create an object obj
obj.geoNIFTI<-geoNIFTI()
tmp<-obj.geoNIFTI$getROIVoxels("/Users/davpas/Desktop/bis/BOOGLO","*metastatic*")
tmp2<- obj.geoNIFTI$getImageVoxelCube("/Users/davpas/Desktop/bis/BOOGLO")
matrixImageROI<-tmp$masked.images$voxelCube


## End(Not run)

kbolab/moddicom documentation built on Nov. 29, 2020, 9:11 p.m.