match_gwas_LDREF: Match GWAS sumstats with LD reference files. Only keep...
In kevinlkx/Mapgen: Multi-function software that performs enrichment, functionally-informed genetic fine-mapping and gene mapping
match_gwas_LDREF R Documentation
Match GWAS sumstats with LD reference files. Only keep variants included in
LD reference.
Description
Match GWAS sumstats with LD reference files. Only keep variants included in
LD reference.
Usage
match_gwas_LDREF(sumstats, R, snp_info)
Arguments
sumstats
A data frame of GWAS summary statistics.
R
LD matrix
snp_info
Variant information for the LD matrix.
Value
A list, containing matched GWAS summary statistics and LD matrix.
kevinlkx/Mapgen documentation built on April 2, 2024, 5:48 a.m.
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| match_gwas_LDREF | R Documentation |
Match GWAS sumstats with LD reference files. Only keep variants included in LD reference.
Description
Match GWAS sumstats with LD reference files. Only keep variants included in LD reference.
Usage
match_gwas_LDREF(sumstats, R, snp_info)
Arguments
sumstats |
A data frame of GWAS summary statistics. |
R |
LD matrix |
snp_info |
Variant information for the LD matrix. |
Value
A list, containing matched GWAS summary statistics and LD matrix.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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