nearby_interactions: Get nearby interactions for enhancer regions near promoters
In kevinlkx/Mapgen: Multi-function software that performs enrichment, functionally-informed genetic fine-mapping and gene mapping
nearby_interactions R Documentation
Get nearby interactions for enhancer regions near promoters
Description
Get nearby interactions for enhancer regions near promoters
Usage
nearby_interactions(enhancer_regions, promoters, max.dist = 20000)
Arguments
enhancer_regions
A GRanges object of enhancer regions
promoters
A GRanges object of promoters
max.dist
Max distance between enhancer regions and promoters (default: 20kb)
Value
A GRanges object of nearby interactions
kevinlkx/Mapgen documentation built on April 2, 2024, 5:48 a.m.
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| nearby_interactions | R Documentation |
Get nearby interactions for enhancer regions near promoters
Description
Get nearby interactions for enhancer regions near promoters
Usage
nearby_interactions(enhancer_regions, promoters, max.dist = 20000)
Arguments
enhancer_regions |
A GRanges object of enhancer regions |
promoters |
A GRanges object of promoters |
max.dist |
Max distance between enhancer regions and promoters (default: 20kb) |
Value
A GRanges object of nearby interactions
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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