Man pages for kewiechecki/tfenrichr
Enrichment tests for transcription factor binding sites.
| countMatches | Converts position output to logical match output. |
| getMatches | Searches a given set of genomic ranges for the motifs... |
| getMatrices | Returns position weight matrices of all permutations of some... |
| getP | Convert motifmatchr score to p-value. |
| getPWMs | Returns a PWMatrixList of all permutations of some NT length... |
| matchPois | Accepts a vector of peak IDs, and performs a Poisson test for... |
| regMat | Determines a matrix of potential regulatory TFs. |
| rmdup | Accepts a PWMatrixList and an output from... |
| setP | Add p-value to GRangesList with a "score" column. |
