regMat: Determines a matrix of potential regulatory TFs.
In kewiechecki/tfenrichr: Enrichment tests for transcription factor binding sites.
regMat R Documentation
Determines a matrix of potential regulatory TFs.
Description
Determines a matrix of potential regulatory TFs.
Usage
regMat(geneToPeak, matches)
Arguments
geneToPeak
A 2-column matrix with the first row corresponding to the row.names of matches and the second giving the Gene ID.
matches
An output from matchMotifs.
Value
A logical matrix with columns corresponding to the motifs in matches and rows corresponding to the genes in geneToPeak.
See Also
getOverlaps, matchMotifs
kewiechecki/tfenrichr documentation built on June 10, 2025, 12:15 a.m.
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| regMat | R Documentation |
Determines a matrix of potential regulatory TFs.
Description
Determines a matrix of potential regulatory TFs.
Usage
regMat(geneToPeak, matches)
Arguments
geneToPeak |
A 2-column matrix with the first row corresponding to the |
matches |
An output from |
Value
A logical matrix with columns corresponding to the motifs in matches and rows corresponding to the genes in geneToPeak.
See Also
getOverlaps, matchMotifs
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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