calc_libsize: Calculate Library Size
In kgellatl/SignalCell: Network Analysis for single cell RNA sequencing Data (sc-RNASeq)
Description
Usage
Arguments
Details
Examples
View source: R/calc_lib_size.R
Description
This function will count the number of reads / UMIs per cell
Usage
1
calc_libsize(input, assay = "counts", label = NULL)
Arguments
input
the input sce object
assay
which assay to calculate library size on
suffix
the
Details
This will calculate the total number of UMIs on a per cell basis.
Examples
1
sce <- calc_libsize(input = sce)
kgellatl/SignalCell documentation built on Sept. 3, 2020, 8:45 a.m.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Description Usage Arguments Details Examples
View source: R/calc_lib_size.R
Description
This function will count the number of reads / UMIs per cell
Usage
1 | calc_libsize(input, assay = "counts", label = NULL)
|
Arguments
input |
the input sce object |
assay |
which assay to calculate library size on |
suffix |
the |
Details
This will calculate the total number of UMIs on a per cell basis.
Examples
1 | sce <- calc_libsize(input = sce)
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Embedding an R snippet on your website
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.