set_xy: Set xy
In kgellatl/SignalCell: Network Analysis for single cell RNA sequencing Data (sc-RNASeq)
Description
Usage
Arguments
Examples
Description
This will set default X and Y coordinates based on the LEM results within reducedDim(sce)
Usage
1
set_xy(input, lem, x = "x", y = "y")
Arguments
input
the input sce
lem
the LEM within reducedDims
x
The x values for 2D representation. Can be character x or a numeric column of sampleFactors(lem)
y
The y values for 2D representation. Can be character y or a numeric column of sampleFactors(lem)
Examples
1
sce <- set_xy(input = sce, lem = "iPCA", x = "x", y = "y")
kgellatl/SignalCell documentation built on Sept. 3, 2020, 8:45 a.m.
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Description Usage Arguments Examples
Description
This will set default X and Y coordinates based on the LEM results within reducedDim(sce)
Usage
1 | set_xy(input, lem, x = "x", y = "y")
|
Arguments
input |
the input sce |
lem |
the LEM within reducedDims |
x |
The x values for 2D representation. Can be character x or a numeric column of sampleFactors(lem) |
y |
The y values for 2D representation. Can be character y or a numeric column of sampleFactors(lem) |
Examples
1 | sce <- set_xy(input = sce, lem = "iPCA", x = "x", y = "y")
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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