reduce_to_vargenes: Reduce each cell type's expression matrix to just the...
In kharchenkolab/scITD: Single-Cell Interpretable Tensor Decomposition
reduce_to_vargenes R Documentation
Reduce each cell type's expression matrix to just the significantly variable genes.
Generally, this should be done through calling the form_tensor() wrapper function.
Description
Reduce each cell type's expression matrix to just the significantly variable genes.
Generally, this should be done through calling the form_tensor() wrapper function.
Usage
reduce_to_vargenes(container)
Arguments
container
environment Project container that stores sub-containers
for each cell type as well as results and plots from all analyses
Value
The project container with pseudobulked matrices reduced to only
the most variable genes.
kharchenkolab/scITD documentation built on Sept. 25, 2023, 11:02 p.m.
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| reduce_to_vargenes | R Documentation |
Reduce each cell type's expression matrix to just the significantly variable genes. Generally, this should be done through calling the form_tensor() wrapper function.
Description
Reduce each cell type's expression matrix to just the significantly variable genes. Generally, this should be done through calling the form_tensor() wrapper function.
Usage
reduce_to_vargenes(container)
Arguments
container |
environment Project container that stores sub-containers for each cell type as well as results and plots from all analyses |
Value
The project container with pseudobulked matrices reduced to only the most variable genes.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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