API for kidcancerlab/rrrSingleCellUtils
A Set of Tools For Single Cell Analysis
| Global functions | |
|---|---|
| %>% | Man page |
| add_atac_metadata | Man page Source code |
| add_nucleosome_signal | Man page Source code |
| annotate_atac | Man page Source code |
| annotate_celltypes | Man page Source code |
| auto_subset | Man page Source code |
| calc_frip | Man page Source code |
| check_cmd | Man page Source code |
| check_load_inputs | Source code |
| feature_hist | Man page Source code |
| filter_raw_data | Source code |
| find_ligands | Man page Source code |
| find_tar_genes | Man page Source code |
| gen_cellecta_bc_data | Man page Source code |
| gen_lig_receptor_ref | Man page Source code |
| get_cell_cycle_genes | Man page Source code |
| kill_cc | Man page Source code |
| load_lig_receptor_data | Man page Source code |
| merge_atac | Man page Source code |
| merge_gex_atac | Man page Source code |
| optimize_silhouette | Man page Source code |
| plot_cc | Man page Source code |
| plot_cols | Man page |
| plot_complex_heatmap | Man page Source code |
| process_ltbc | Man page Source code |
| process_seurat | Man page Source code |
| process_seurat_atac | Man page Source code |
| r_dim_plot | Man page Source code |
| r_feature_plot | Man page Source code |
| r_make_loom_files | Man page Source code |
| rrrSingleCellUtils | Man page |
| rrrSingleCellUtils-package | Man page |
| run_fdl | Man page Source code |
| silhouette_cluster_mean | Man page Source code |
| silhouette_mean | Man page Source code |
| silhouette_plot | Man page Source code |
| silhouette_seurat | Man page Source code |
| silhouette_to_df | Man page Source code |
| tenx_load_qc | Man page Source code |
| theme_roberts | Man page Source code |
| tss_enrichment | Man page Source code |
| use_sbatch_template | Man page Source code |
| write_off_md | Man page Source code |
