silhouette_to_df: Run silhouette scoring and return a to data frame
In kidcancerlab/rrrSingleCellUtils: A Set of Tools For Single Cell Analysis
silhouette_to_df R Documentation
Run silhouette scoring and return a to data frame
Description
This function takes in a seurat object, runs silhouette scoring and returns
a data frame. This function is to use with apply in optimize_silhouette
instead of a for loop
Usage
silhouette_to_df(sobject, res, reduction = "pca")
Arguments
sobject
The silhouette object to convert.
res
The resolution parameter.
reduction
The reduction data used (default is "pca").
Value
A data frame containing the silhouette values.
kidcancerlab/rrrSingleCellUtils documentation built on April 17, 2025, 5:10 p.m.
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| silhouette_to_df | R Documentation |
Run silhouette scoring and return a to data frame
Description
This function takes in a seurat object, runs silhouette scoring and returns a data frame. This function is to use with apply in optimize_silhouette instead of a for loop
Usage
silhouette_to_df(sobject, res, reduction = "pca")
Arguments
sobject |
The silhouette object to convert. |
res |
The resolution parameter. |
reduction |
The reduction data used (default is "pca"). |
Value
A data frame containing the silhouette values.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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