loadCells: Loads an Xell matlab file into the SPData format
In kieranrcampbell/SpatialPRo: SpatialPRo: methods for spacial proteomics data
Description
Usage
Arguments
Value
Description
This function parses the matlab files, pulling out relevant proteins
in the 'D' channel and validates that the correct proteins are present. Matlab
files can be found at
https://s3.amazonaws.com/supplemental.cytobank.org/report_data/report_113/Figure_5/Figure_5_raw_image_files.zip
Usage
1
2
Arguments
filename
The matlab file
id
The id to give the sample
control.isotopes
The isotopes used for control to exclude from analysis
Value
An object of class SPData. Note that from the data on cytobank, boundary weights nor cell positions can be found.
kieranrcampbell/SpatialPRo documentation built on May 20, 2019, 9:24 a.m.
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Description Usage Arguments Value
Description
This function parses the matlab files, pulling out relevant proteins in the 'D' channel and validates that the correct proteins are present. Matlab files can be found at https://s3.amazonaws.com/supplemental.cytobank.org/report_data/report_113/Figure_5/Figure_5_raw_image_files.zip
Usage
1 2 |
Arguments
filename |
The matlab file |
id |
The id to give the sample |
control.isotopes |
The isotopes used for control to exclude from analysis |
Value
An object of class SPData. Note that from the data on cytobank, boundary weights nor cell positions can be found.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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