UnifyRowNames: Unify row names in data frame with the same order of gene...

In kmezhoud/canceR: A Graphical User Interface for accessing and modeling the Cancer Genomics Data of MSKCC

Unify row names in data frame with the same order of gene list.

Description

Unify row names in data frame with the same order of gene list.

Usage

UnifyRowNames(x,geneList)

Arguments

x	data frame with gene symbol in the row name
geneList	a gene list

Value

a data frame having the gene in row name ordered as in gene list.

Examples

cgds <- cBioPortal(
hostname = "www.cbioportal.org",
protocol = "https",
api = "/api/v2/api-docs"
)
## Not run: 
getDataByGenes( api =  cgds,
studyId = "gbm_tcga_pub",
genes = c("NF1", "TP53", "ABL1"),
by = "hugoGeneSymbol",
molecularProfileIds = "gbm_tcga_pub_mrna"
)

## End(Not run)

kmezhoud/canceR documentation built on March 4, 2024, 12:34 a.m.