Description Usage Arguments Value Examples
Replace each subset of features with a single score representing the geometric mean for each subject across those features. Do NOT pass standardized data. Does not work with ordering subclasses (IgG1 before IgG2, etc. - see how fcgo_get_prop works).
1 | fcdr_fc_breadth(fc, to_condense)
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fc |
The Fc Array data frame. |
to_condense |
A vector of strings of features that you want to collapse into individual scores. |
The Fc Array data frame, with each class of features provided replaced with individual scores. None of the other feature data remains.
1 2 3 4 | # pass only the colnames that contain IgG3
gopts$feat_ant = c("gp120","gp140","V1.V2.","gag","p17,p24,p51,p55,p66")
# contains gp120_score, gp140_score, V1.V2._score, etc.
fc_new = fcdr_breath_score(fc, gopts$feat_ant)
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