Files in kokonech/InTAD
Search for correlation between epigenetic signals and gene expression in TADs
DESCRIPTION
InTAD.Rproj
NAMESPACE
R/InTADSig-methods.R
R/InTADSig.R
R/combineSignalsInTAD.R
R/combineSignalsWithLoops.R
R/example_data_info.R
R/filterGeneExpr.R
R/findCorrelation.R
R/plotCorrelation.R
README.md
data/.Rapp.history
data/enhSelCoords.rda
data/loops_imr90.rda
data/mbAnnData.rda
data/mbSamplesRPKM.rda
data/mbSelEnhSignals.rda
data/tad_hg19.rda
data/txsSel.rda
inst/CITATION
inst/NEWS
man/InTADSig.Rd
man/combineInTAD.Rd
man/combineWithLoops.Rd
man/enhSel.Rd
man/enhSelGR.Rd
man/exprs.Rd
man/filterGeneExpr.Rd
man/findCorFromLoops.Rd
man/findCorrelation.Rd
man/fnSE.Rd
man/geneCoords.Rd
man/get.enr.bg.normfit.Rd
man/loadSigInTAD.Rd
man/loopsDfSel.Rd
man/mbAnnData.Rd
man/newSigInTAD.Rd
man/plotCorAcrossRef.Rd
man/plotCorrelation.Rd
man/rpkmCountsSel.Rd
man/sigCoords.Rd
man/signals.Rd
man/tadGR.Rd
man/txsSel.Rd
tests/testthat.R
tests/testthat/test-cor.R
tests/testthat/test-expr-filter.R
tests/testthat/test-objects.R
vignettes/InTAD.Rmd
vignettes/figures/loops_image.png
