API for krumsieklab/MoDentify
Phenotype-driven module identification
| Global functions | |
|---|---|
| MoDentify | Man page |
| MoDentify-package | Man page |
| aggregatedMean | Man page Source code |
| calculateModuleRepresentatives | Man page Source code |
| calculateModuleScore | Man page Source code |
| deleteDuplicates | Man page Source code |
| deleteSupergraphs | Man page Source code |
| drawModule | Man page Source code |
| drawModules | Man page Source code |
| drawNetworkWithModules | Man page Source code |
| eigenMetabolites | Man page Source code |
| generateNetwork | Man page Source code |
| generatePathwaysNetwork | Man page Source code |
| getMergedModules | Man page Source code |
| getNeighborsForModule | Man page Source code |
| getToMerge | Man page Source code |
| ggEdgesBetweenAttributes | Man page Source code |
| ggExplainedVariance | Man page Source code |
| greedyModuleSelection | Man page Source code |
| identifyModules | Man page Source code |
| linearScoring | Man page Source code |
| orderAnnotation | Man page Source code |
| qmdiab.annos | Man page |
| qmdiab.data | Man page |
| qmdiab.phenos | Man page |
| writeModules | Man page Source code |
