Man pages for kstreet13/slingshot
Tools for ordering single-cell sequencing

getCurvesConstruct Smooth Lineage Curves
getLineagesInfer Lineage Structure from Clustered Samples
newSlingshotDataSetInitialize an object of class 'SlingshotDataSet'
pairs-SlingshotDataSetPairs plot of Slingshot output
plot3d-SlingshotDataSetPlot Slingshot output in 3D
plotGenePseudotimePlot Gene Expression by Pseudotime
plot-SlingshotDataSetPlot Slingshot output
predict.SlingshotDataSetPredict from a Slingshot model
slingAdjacencyExtract Slingshot adjacency matrix
slingCurvesExtract simultaneous principal curves
slingLineagesExtract the Slingshot lineages
slingParamsMethods for parameters used by Slingshot
slingPseudotimeGet Slingshot pseudotime values
slingshotPerform lineage inference with Slingshot
SlingshotDataSetExtract Slingshot output
SlingshotDataSet-classClass 'SlingshotDataSet'
slingshotExampleBifurcating lineages data
splatterParametersParameters for simulating a single lineage
kstreet13/slingshot documentation built on July 6, 2018, 11:27 p.m.