Files in kstreet13/slingshot
Tools for ordering single-cell sequencing
.Rbuildignore
.github/.gitignore
.github/workflows/check-bioc.yml
.gitignore
DESCRIPTION
NAMESPACE
NEWS.md
R/AllClasses.R
R/AllGenerics.R
R/AllHelperFunctions.R
R/branchID.R
R/conversion.R
R/embedCurves.R
R/getCurves.R
R/getLineages.R
R/plotting.R
R/predict.R
R/slingshot.R
README.md
codecov.yml
data-raw/slingshotExample.R
data/slingshotExample.rda
inst/CITATION
inst/REFERENCES.bib
inst/slingshot_sticker.png
man/SlingshotDataSet-class.Rd
man/SlingshotDataSet.Rd
man/as.PseudotimeOrdering.Rd
man/as.SlingshotDataSet.Rd
man/embedCurves.Rd
man/getCurves.Rd
man/getLineages.Rd
man/newSlingshotDataSet.Rd
man/pairs-SlingshotDataSet.Rd
man/plot-SlingshotDataSet.Rd
man/plot3d-SlingshotDataSet.Rd
man/predict.SlingshotDataSet.Rd
man/slingBranchGraph.Rd
man/slingBranchID.Rd
man/slingClusterLabels.Rd
man/slingCurves.Rd
man/slingLineages.Rd
man/slingMST.Rd
man/slingParams.Rd
man/slingPseudotime.Rd
man/slingReducedDim.Rd
man/slingshot.Rd
man/slingshotExample.Rd
tests/testthat.R
tests/testthat/test_slingshot.R
vignettes/bibFile.bib
vignettes/conditionsVignette.Rmd
vignettes/vignette.Rmd
