NEWS.md

In kstreet13/slingshot: Tools for ordering single-cell sequencing

changes in version 2.0.0

• Added a NEWS.md file to track changes to the package.

• Changed default output of most functions from SlingshotDataSet to PseudotimeOrdering and added conversion functions between them and SingleCellExperiment.

• getLineages now relies on createClusterMST

• Removed plotGenePseudotime

• added as.df option to slingCurves and slingMST, which provide relevant information for plotting as data.frame objects. This should help those plotting Slingshot results with ggplot, especially for our traffic package.

• updated all documentation.

kstreet13/slingshot documentation built on April 6, 2023, 11:12 p.m.