findSeuratClusters | R Documentation |
Cluster sample via Seurat
findSeuratClusters(
object,
mtr_name = getActiveMatrixName(object, of_sample = of_sample),
FindVariableFeatures = list(selection.method = "vst", nfeatures = 2000),
RunPCA = list(npcs = 60),
FindNeighbors = list(dims = 1:30),
FindClusters = list(resolution = 0.8),
...
)
object |
A valid spata-object. |
mtr_name |
Character value. The name of the matrix of interest. |
FindVariableFeatures |
A named list of arguments given to |
RunPCA |
A named list of arguments given to |
FindNeighbors |
A named list of arguments given to |
FindClusters |
A named list of arguments given to |
... |
Additional parameters given to |
A tidy spata-data.frame containing the cluster variables.
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