plotDimRed: Plot dimensional reduction

Description Usage Arguments Value

View source: R/plot-family.R

Description

Visualizes the dimensional reduction method of choice.

Usage

1
2
3
4
5
6
7
plotDimRed(
  object,
  dim_red = "umap",
  color_to = NULL,
  pt_size = 1,
  pt_alpha = 0.9
)

Arguments

object

A valid cell tracer object.

color_to

Character value. The variable that is to be displayed or highlighted by the dots color.

pt_size

Numeric value. Denotes the size and alpha values of the points of the scatterplot.

pt_alpha

Numeric value. Denotes the size and alpha values of the points of the scatterplot.

Value

A ggplot.


kueckelj/celltracer documentation built on June 2, 2021, 6:37 a.m.