my_mantel: Customed mantel

In kun-ecology/ecoloop: Loop for ecological data analysis

Customed mantel

Description

Customed mantel

Usage

my_mantel(
  y_mat,
  x_mat,
  y.dist = NULL,
  x.dist = NULL,
  foreach = NULL,
  method = NULL,
  ...
)

Arguments

y_mat	a dist or dataframe
x_mat	a dist or dataframe
y.dist	methods for dissimilarity calculation of y_mat
x.dist	methods for dissimilarity calculation of x_mat
foreach	conduct mantel test for each variables in x.dist or not (by default)
method	Correlation method, as accepted by cor: "pearson", "spearman" or "kendall"
...	further arguments for vegan::mantel

Value

a list contain 1) mode information. 2) pairwise dissimilarity of x_mat and y_mat, for visualization 3) mode. 4) summary of the mode

kun-ecology/ecoloop documentation built on Jan. 9, 2025, 10:20 a.m.