my_vpa: Conduct VPA after CCA or RDA

In kun-ecology/ecoloop: Loop for ecological data analysis

Conduct VPA after CCA or RDA

Description

Conduct VPA after CCA or RDA

Usage

my_vpa(
  sp,
  env_ls,
  sp.trans = NULL,
  env.trans = NULL,
  mode = NULL,
  force.mode = NULL,
  ...
)

Arguments

sp	a dataframe, row as sites while column as species names
env_ls	a list, with environmental variables data as elements
sp.trans	a string, method for species data transformation
env.trans	a string, method for envrionmental data transformation
mode	a string, when force.mode=F (default), it indicates which model to use when 3<dca.axlength<4 when force.mode=T, it indicates which mode to conduct forcely
force.mode	T or F (default)
...	further argumens for adespatial::forward.sel

Value

a list

kun-ecology/ecoloop documentation built on Jan. 9, 2025, 10:20 a.m.