Files in labbcb/GA4GHclient
A Bioconductor package for accessing GA4GH API data servers
.Rbuildignore
.gitignore
.travis.yml
DESCRIPTION
GA4GHclient.Rproj
NAMESPACE
NEWS
R/AllUtilities.R
R/GA4GHclient-package.R
R/HGVSnames.R
R/getBiosample.R
R/getCallSet.R
R/getDataset.R
R/getExpressionLevel.R
R/getFeature.R
R/getFeatureSet.R
R/getIndividual.R
R/getReadGroupSet.R
R/getReference.R
R/getReferenceSet.R
R/getRnaQuantification.R
R/getRnaQuantificationSet.R
R/getVariant.R
R/getVariantAnnotationSet.R
R/getVariantSet.R
R/listReferenceBases.R
R/makeVCFFromGA4GHResponse.R
R/makeVCFHeaderFromGA4GHResponse.R
R/searchBiosamples.R
R/searchCallSets.R
R/searchDatasets.R
R/searchExpressionLevels.R
R/searchFeatureSets.R
R/searchFeatures.R
R/searchIndividuals.R
R/searchPhenotypeAssociationSets.R
R/searchPhenotypeAssociations.R
R/searchReadGroupSets.R
R/searchReads.R
R/searchReferenceSets.R
R/searchReferences.R
R/searchRnaQuantificationSets.R
R/searchRnaQuantifications.R
R/searchVariantAnnotationSets.R
R/searchVariantAnnotations.R
R/searchVariantSets.R
R/searchVariants.R
R/searchVariantsByGRanges.R
README.md
inst/extdata/vignette.rda
man/GA4GHclient-package.Rd
man/HGVSnames.Rd
man/getBiosample.Rd
man/getCallSet.Rd
man/getDataset.Rd
man/getExpressionLevel.Rd
man/getFeature.Rd
man/getFeatureSet.Rd
man/getIndividual.Rd
man/getReadGroupSet.Rd
man/getReference.Rd
man/getReferenceSet.Rd
man/getRnaQuantification.Rd
man/getRnaQuantificationSet.Rd
man/getVariant.Rd
man/getVariantAnnotationSet.Rd
man/getVariantSet.Rd
man/listReferenceBases.Rd
man/makeVCFFromGA4GHResponse.Rd
man/makeVCFHeaderFromGA4GHResponse.Rd
man/searchBiosamples.Rd
man/searchCallSets.Rd
man/searchDatasets.Rd
man/searchExpressionLevels.Rd
man/searchFeatureSets.Rd
man/searchFeatures.Rd
man/searchIndividuals.Rd
man/searchPhenotypeAssociationSets.Rd
man/searchPhenotypeAssociations.Rd
man/searchReadGroupSets.Rd
man/searchReads.Rd
man/searchReferenceSets.Rd
man/searchReferences.Rd
man/searchRnaQuantificationSets.Rd
man/searchRnaQuantifications.Rd
man/searchVariantAnnotationSets.Rd
man/searchVariantAnnotations.Rd
man/searchVariantSets.Rd
man/searchVariants.Rd
man/searchVariantsByGRanges.Rd
tests/testthat.R
tests/testthat/test-HGVSnames.R
tests/testthat/test-getBiosample.R
tests/testthat/test-getCallSet.R
tests/testthat/test-getDataset.R
tests/testthat/test-getExpressionLevel.R
tests/testthat/test-getFeature.R
tests/testthat/test-getFeatureSet.R
tests/testthat/test-getIndividual.R
tests/testthat/test-getReadGroupSet.R
tests/testthat/test-getReference.R
tests/testthat/test-getReferenceSets.R
tests/testthat/test-getRnaQuantification.R
tests/testthat/test-getRnaQuantificationSet.R
tests/testthat/test-getVariant.R
tests/testthat/test-getVariantAnnotationSet.R
tests/testthat/test-getVariantSet.R
tests/testthat/test-listReferenceBases.R
tests/testthat/test-makeVCFFromGA4GHResponse.R
tests/testthat/test-makeVCFHeaderFromGA4GHResponse.R
tests/testthat/test-request.get.R
tests/testthat/test-request.post.R
tests/testthat/test-searchBiosamples.R
tests/testthat/test-searchCallSets.R
tests/testthat/test-searchDatasets.R
tests/testthat/test-searchExpressionLevels.R
tests/testthat/test-searchFeatureSets.R
tests/testthat/test-searchFeatures.R
tests/testthat/test-searchIndividuals.R
tests/testthat/test-searchPhenotypeAssociationSets.R
tests/testthat/test-searchPhenotypeAssociations.R
tests/testthat/test-searchReadGroupSets.R
tests/testthat/test-searchReads.R
tests/testthat/test-searchReferenceSets.R
tests/testthat/test-searchReferences.R
tests/testthat/test-searchRnaQuantificationSets.R
tests/testthat/test-searchRnaQuantifications.R
tests/testthat/test-searchVariantAnnotationSets.R
tests/testthat/test-searchVariantAnnotations.R
tests/testthat/test-searchVariantSets.R
tests/testthat/test-searchVariants.R
tests/testthat/test-searchVariantsByGRanges.R
vignettes/GA4GHclient.Rmd
