getVariantSet: getVariantSet function.
In labbcb/GA4GHclient: A Bioconductor package for accessing GA4GH API data servers

Description Usage Arguments Details Value See Also Examples

Get a variant set by its ID.

1	getVariantSet(host, variantSetId, asVCFHeader = TRUE)

`host`	URL of GA4GH API data server.
`variantSetId`	The ID of the VariantSet to be retrieved.
`asVCFHeader`	If `TRUE` the function will return an `VCFHeader` object (default), otherwise it will return an `DataFrame`.

This function requests GET host/variantsets/variantSetId.

DataFrame object. It can be converted into VCFHeader object.

DataFrame, searchVariantSets, VCFHeader, makeVCFHeaderFromGA4GHResponse

host <- "http://1kgenomes.ga4gh.org/"
## Not run: 
datasetId <- searchDatasets(host, nrows = 1)$id
variantSetId <- searchVariantSets(host, datasetId, nrows = 1)$id
getVariantSet(host, variantSetId)

getVariantSet(host, variantSetId, asVCF = FALSE)

## End(Not run)