ClusterReport: Cluster Report
In laderast/Consense: Consense: a package for evaluating multiple clusterings

Description Usage Arguments Value Author(s) See Also Examples

After the result set has been returned by CompareClustering, generates all tables and relevant figures for that result set.

1	ClusterReport(clusterresults, write=FALSE, filebase)

`clusterresults`	A result set from CompareClustering.
`write`

If TRUE, write cluster results to a file. If FALSE, display cluster results only.

filebase

A base file name. Files will be saved in the current directory.

The within metrics are displayed as a table and the cluster results are saved as a graph.

Files are saved in the current working directory. Currently the following files are saved:

`filebase within.txt`	A tab delimited text file of the various metrics, as described in withinmetrics().
`filebase clusters.txt`	A tab-delimted text file of all clusterings by assignment.
`filebase jaccard.jpg`	A Jpeg of the metaclustering dendrogram for the Jaccard Metric, comparing all methods. Note that the clustering is actually done on (1-Jaccard).
`filebase jaccard.txt`	A text file of the actual Jaccard metrics in tab-delimited format.
`filebase variation.jpg`	A Jpeg of the metaclustering dendrogram for the Variation of Information metric, comparing all methods.
`filebase variation.txt`	A text file of the actual Variation metrics in tab-delimited format.

Ted Laderas (laderast@ohsu.edu)

withinmetrics, betweenmetrics, CompareClustering

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    data(choresults)
    #display results and save files to current working directory
    ClusterReport(choresults, write=TRUE, filebase="choresults")