API for lambdamoses/BUStoolsR
kallisto | bustools R utilities

Global functions
.annots_from_fa Source code
.get_velocity_files Man page Source code
EC2gene Man page Source code
EC2gene_export Source code
annot_circular Man page Source code
annots_from_fa_GRanges Man page Source code
annots_from_fa_df Man page Source code
cellranger_biotypes Man page
check_char1 Man page Source code
check_genome Man page Source code
check_genome_present Source code
check_gff Man page Source code
check_out_path Source code
check_tag_present Man page Source code
check_tx Man page Source code
dl_transcriptome Man page Source code
ensembl_gene_biotypes Man page
ensembl_gff_mcols Man page
ensembl_gtf_mcols Man page
ensembl_tx_biotypes Man page
err0 Source code
fill_cell_gene Source code
filter_biotype Source code
filter_biotype_gff3 Source code
filter_chr Source code
get_inflection Man page Source code
get_intron_flanks Man page Source code
get_knee_df Man page Source code
get_velocity_files Man page
get_velocity_files,EnsDb-method Man page
get_velocity_files,GRanges-method Man page
get_velocity_files,TxDb-method Man page
get_velocity_files,character-method Man page
knee_plot Man page Source code
make_sparse_matrix Man page Source code
match_style Man page Source code
msg1 Source code
msg2 Source code
my_useMart Source code
read_count_output Man page Source code
read_velocity_output Man page Source code
refseq_gff_mcols Man page
save_tr2g_bustools Man page Source code
sort_tr2g Man page Source code
species2dataset Man page Source code
standardize_tags Man page Source code
sub_annot Man page Source code
subset_annot Man page
subset_annot,BSgenome-method Man page
subset_annot,DNAStringSet-method Man page
tr2g_EnsDb Man page Source code
tr2g_GRanges Man page Source code
tr2g_TxDb Man page Source code
tr2g_ensembl Man page Source code
tr2g_fasta Man page Source code
tr2g_gff3 Man page Source code
tr2g_gtf Man page Source code
tr2g_junction Man page Source code
transcript2gene Man page Source code
unlist_rename Source code
validate_velocity_input Man page Source code
which_biotypes Source code
write_tr2g_fun Source code
write_velocity_output Man page Source code
lambdamoses/BUStoolsR documentation built on June 9, 2021, 6:15 p.m.