SeuratBasics-package: Tools for single-cell genomics

In lambdamoses/SeuratBasics: Slimmed down version of Seurat

Description

This is a slimmed down version of Seurat, only keeping functionalities deemed the most commonly used.

Package options

Seurat uses the following [options()] to configure behaviour:

Seurat.memsafe

global option to call gc() after many operations. This can be helpful in cleaning up the memory status of the R session and prevent use of swap space. However, it does add to the computational overhead and setting to FALSE can speed things up if you're working in an environment where RAM availability is not a concern.

Seurat.checkdots

For functions that have ... as a parameter, this controls the behavior when an item isn't used. Can be one of warn, stop, or silent.

lambdamoses/SeuratBasics documentation built on May 6, 2020, 9:32 a.m.