FetchData: Access cellular data

In lambdamoses/SeuratBasics: Slimmed down version of Seurat

Description

Retreives data (feature expression, PCA scores, metrics, etc.) for a set of cells in a Seurat object

Usage

FetchData(object, vars, cells = NULL, slot = "data")

Arguments

object	Seurat object
vars	List of all variables to fetch, use keyword 'ident' to pull identity classes
cells	Cells to collect data for (default is all cells)
slot	Slot to pull feature data for

Value

A data frame with cells as rows and cellular data as columns

Examples

pc1 <- FetchData(object = pbmc_small, vars = 'PC_1')
head(x = pc1)
head(x = FetchData(object = pbmc_small, vars = c('groups', 'ident')))

lambdamoses/SeuratBasics documentation built on May 6, 2020, 9:32 a.m.