API for lazappi/RNAtools
RNAtools - Functions for processing RNA-seq data

Global functions
combineMatrices Man page Source code
countBoxplots Man page Source code
countDensity Man page Source code
countHeatmap Man page Source code
countMA Man page Source code
counts2DESeq Man page Source code
counts2DESeq2 Man page Source code
counts2Objects Man page Source code
counts2edgeR Man page Source code
counts2voom Man page Source code
cpmTransform Man page Source code
deseq2Norm Man page Source code
deseq2Test Man page Source code
deseqNorm Man page Source code
deseqTest Man page Source code
edgeRNorm Man page Source code
edgeRTest Man page Source code
finiteMean Source code
finiteVar Source code
geneSummary Man page Source code
geneVenn Man page Source code
getMAData Source code
heatmapDendro Man page Source code
heatmapLegend Man page Source code
jaccardTable Man page Source code
lengthenMatrix Man page Source code
listBoxplots Man page Source code
listCountMA Man page Source code
listDensity Man page Source code
listHeatmaps Man page Source code
listIntersect Source code
listMDS Man page Source code
listNorm Man page Source code
listPCA Man page Source code
listPlotPvals Man page Source code
listRegularise Man page Source code
listResultsMA Man page Source code
listSetdiff Source code
listTest Man page Source code
listUnion Source code
listVolcano Man page Source code
logCPMTransform Man page Source code
logTransform Man page Source code
makeHeatmap Man page Source code
plotFoldChange Man page Source code
plotPvals Man page Source code
regulariseResults Man page Source code
resultsMA Man page Source code
rlogTransform Man page Source code
sampleMDS Man page Source code
samplePCA Man page Source code
setTable Man page Source code
showHeatmap Man page Source code
transformCounts Man page Source code
vennGenes Man page Source code
vennSets Source code
volcanoPlot Man page Source code
voomNorm Man page Source code
voomTest Man page Source code
vstTransform Man page Source code
lazappi/RNAtools documentation built on May 21, 2017, 9:31 a.m.