listMDS: List MDS

In lazappi/RNAtools: RNAtools - Functions for processing RNA-seq data

Description

Produce MDS plots from a list of matrices

Usage

listMDS(data.list, top = nrow(data.list[[1]]),
  groups = colnames(data.list[[1]]), selection = "pairwise")

Arguments

data.list	List of matrices to plot
top	Number of rows with highes variance to select for plotting
groups	Vector of groups assigned to sample columns
selection	Select rows in a "pariwise" manner between samples or "common" across all samples

Value

List of ggplot2 objects containing MDS plots

lazappi/RNAtools documentation built on May 20, 2019, 8:26 p.m.