deseq2Test: DESeq2 Test
In lazappi/RNAtools: RNAtools - Functions for processing RNA-seq data
Description
Usage
Arguments
Value
Description
Test a normalised DESeqDataSet using DESeq2
Usage
1
deseq2Test(count.data, group1, group2, filter)
Arguments
count.data
Normalised DESeqDataSet object to normalise
group1
First group to test, the reference or control
group2
Second group to test, the treatment
filter
Boolean, whether to apply HTSFilter
Value
DESeqResults object containing test results
lazappi/RNAtools documentation built on May 20, 2019, 8:26 p.m.
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Description Usage Arguments Value
Description
Test a normalised DESeqDataSet using DESeq2
Usage
1 | deseq2Test(count.data, group1, group2, filter)
|
Arguments
count.data |
Normalised DESeqDataSet object to normalise |
group1 |
First group to test, the reference or control |
group2 |
Second group to test, the treatment |
filter |
Boolean, whether to apply HTSFilter |
Value
DESeqResults object containing test results
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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