dge_wrapper: Wrapper function to create dge from txi

View source: R/deg_wrappers.R

dge_wrapperR Documentation

Wrapper function to create dge from txi

Description

Wrapper which returns a dge that has been filtered and is ready for downstream processing. I've added a bunch of errors here which should prevent mistakes in creating/using this object

Usage

dge_wrapper(txi, p, gene_annots)

Arguments

txi

'lengthScaledTPM' txi object

p

data.frame of sample phenodata

gene_annots

gene annotations

Value

DGE object


lefeverde/lefutils documentation built on Sept. 18, 2024, 7:30 a.m.