get_deseq2_results: Returns DESeq2 results in long format
In lefeverde/lefutils: Robust R functions for common data wrangling tasks
get_deseq2_results R Documentation
Returns DESeq2 results in long format
Description
Returns DESeq2 results in long format
Usage
get_deseq2_results(dds_object, gene_annots = NULL, use_shrinkage = FALSE)
Arguments
dds_object
DDS object after running DESeq
gene_annots
Gene annotations which if not given are assumed
use_shrinkage
logical whether to perform lfcshrinkage
Value
data.frame of results in long(ish) format
lefeverde/lefutils documentation built on Sept. 18, 2024, 7:30 a.m.
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| get_deseq2_results | R Documentation |
Returns DESeq2 results in long format
Description
Returns DESeq2 results in long format
Usage
get_deseq2_results(dds_object, gene_annots = NULL, use_shrinkage = FALSE)
Arguments
dds_object |
DDS object after running DESeq |
gene_annots |
Gene annotations which if not given are assumed |
use_shrinkage |
logical whether to perform lfcshrinkage |
Value
data.frame of results in long(ish) format
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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