Fread: Simple wrapper around data.table::fread

In leylabmpi/LeyLabRMisc: Ley Lab misc R functions, rmd templates, etc.

Simple wrapper around data.table::fread

Description

Simple wrapper around data.table::fread

Usage

Fread(
  infile = NULL,
  cmd = NULL,
  sep = "\t",
  check.names = TRUE,
  tmpdir = file.path("/ebio", "abt3_scratch", Sys.info()[["user"]], "R_tmp"),
  ...
)

Arguments

infile	Input file name
cmd	Command instead of input file (eg., "gunzip -c INFILE")
sep	Value delimiter
check.names	Format check column names
...	Passed to data.table::fread
tmp_dir	Temp file directory. Scratch directory by default

Value

data.table

leylabmpi/LeyLabRMisc documentation built on Nov. 3, 2022, 3:45 p.m.