itol_simplebar | R Documentation |
https://itol.embl.de/help.cgi#bar
itol_simplebar( df, dataset_label, out_file = "itol_simplebar.txt", out_dir = getwd(), legend = NULL, WIDTH = 200 )
df |
A data.frame, tibble, or data.table (see above) |
dataset_label |
What to label the itol dataset |
out_file |
Name of the output file |
out_dir |
Where to write the output |
legend |
Specify particular legend (see |
WIDTH |
Bar width |
If a data.frame is provided, the row names must exactly match the tree node labels. The 1st column with be used for plotting. If a data.table or tibble is provided, the first column values must exactly match the tree node labels. The 2nd column will be used for plotting.
# data.frame input df = data.frame(values = c(1,1,2), row.names = LETTERS[1:3]) itol_simplebar(df, 'test_label') # data.table dt = data.table(taxa = LETTERS[1:3], values = c(1,1,2)) itol_simplebar(dt, 'test_label')
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