encode_seqs: Encode sequences into binyary format
In lindberg-m/contextendR: Analyse genomic data with regard to sequence contexts
Description
Split data into cytosines and thymines and encode mutations
and sequence contexts
Usage
1
encode_seqs(position_collection.gr, kmers)
Arguments
position_collection.gr
GRanges object. With mutation types and sequence contexts
kmers
Character vector. Kmers to encode
lindberg-m/contextendR documentation built on Jan. 8, 2022, 3:16 a.m.
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Description
Split data into cytosines and thymines and encode mutations and sequence contexts
Usage
1 | encode_seqs(position_collection.gr, kmers)
|
Arguments
position_collection.gr |
GRanges object. With mutation types and sequence contexts |
kmers |
Character vector. Kmers to encode |
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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