plot_kmer_positions: Plot positional effects of kmers
In lindberg-m/contextendR: Analyse genomic data with regard to sequence contexts

Visualize the ratio between expected and observed number of mutations at positions around a certain kmer

1	plot_kmer_positions(dataset, kmer, lambda = 0)

`dataset`	A dataset generated from 'extend_positions'
`kmer`	A single kmer of interest
`lambda`	A penalty factor, giving positions with low counts a lower estimate

A ggplot object

lindberg-m/contextendR documentation built on Jan. 8, 2022, 3:16 a.m.

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