MutationTypeContribution: Compute the contribution
In liumoLM/SigQBiC: Signature-QBiC:Predict the effect of mutational signatures on TF binding
Description
Usage
Arguments
Value
View source: R/MutationTypeContribution.R
Description
Compute the contribution
Usage
1
MutationTypeContribution(uPBM_QBiC_scores, p_values, spectrum)
Arguments
uPBM_QBiC_scores
All QBiC scores for a universal PBM
p_values
p_values for all twelvemers
spectrum
A list of possibilities for each mutation type(mutational spectrum) or a character of name of mutational signature(mutational signature)
Value
A matrix with contribution to the GR and LR for each of 96 mutation types
liumoLM/SigQBiC documentation built on Feb. 5, 2021, 12:53 a.m.
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Description Usage Arguments Value
View source: R/MutationTypeContribution.R
Description
Compute the contribution
Usage
1 | MutationTypeContribution(uPBM_QBiC_scores, p_values, spectrum)
|
Arguments
uPBM_QBiC_scores |
All QBiC scores for a universal PBM |
p_values |
p_values for all twelvemers |
spectrum |
A list of possibilities for each mutation type(mutational spectrum) or a character of name of mutational signature(mutational signature) |
Value
A matrix with contribution to the GR and LR for each of 96 mutation types
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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