PyrPenta: Convert mutations to pyrimidine centred.
In liumoLM/SigQBiC: Signature-QBiC:Predict the effect of mutational signatures on TF binding
Description
Usage
Arguments
Value
Description
This function converts trinucleotide context mutations to pyrimidine centred. For example, CGA > CAA will be converted to TCG > TTG
Usage
1
PyrPenta(mutstring)
Arguments
mutstring
A string with for characters: proceeding base - reference base - following base - mutated base (For example, CGA > CCA was input as CGAC)
Value
A pyrimidine centred mutation
liumoLM/SigQBiC documentation built on Feb. 5, 2021, 12:53 a.m.
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Description Usage Arguments Value
Description
This function converts trinucleotide context mutations to pyrimidine centred. For example, CGA > CAA will be converted to TCG > TTG
Usage
1 | PyrPenta(mutstring)
|
Arguments
mutstring |
A string with for characters: proceeding base - reference base - following base - mutated base (For example, CGA > CCA was input as CGAC) |
Value
A pyrimidine centred mutation
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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