NEWS.md

In lpantano/bcbioSmallRna: small RNA-Seq Utilities

bcbioSmallRna 0.0.1

Fix

• Compatible with last isomiRs version
• Fix annotation names for inter-genic clusters
• Add plots to the template and remove it from the function
• Fix bcbioSmallSizeDist to avoid duplication of columns when getting adapter information

Feature

• Re-organize cluster figure in QC report
• Use multiqc file to read metrics
• Add sequence matrix for cluster analysis
• Plot size disribution by small RNA type
• Change to use varianzeStabilization from DESeq2 to normalize counts, as consequence, name of slot of normalized count changed to log
• Load final folder using project folder path instead
• Feature: Improve cluster annotation

lpantano/bcbioSmallRna documentation built on March 5, 2020, 9:17 a.m.