tran.reg: The regression part of limma trans.
In lunge111/intSEQ: Differential Expression Analysis of RNA-seq Data with Integrated Likelihood Method
Description
Usage
Arguments
Value
Author(s)
See Also
Examples
Description
Regress the third root of residual squared error on the mean.
Usage
1
Arguments
x
The transformation parameter.
tmat
The count data.
cond
The predictor variable indicating different groups.
square
Whether return a squared value of regression coefficient.
Value
A numeric scalar of (squared) regression coefficient of the variance on the started log of mean.
Author(s)
Yilun Zhang, David Rocke
See Also
tran1, tran.est, limma.trans.running
Examples
1
2
3
data(count.data)
data(condition)
tran.reg(0.3, count.data, condition, square = FALSE)
lunge111/intSEQ documentation built on May 20, 2019, 9:38 a.m.
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Description Usage Arguments Value Author(s) See Also Examples
Description
Regress the third root of residual squared error on the mean.
Usage
1 |
Arguments
x |
The transformation parameter. |
tmat |
The count data. |
cond |
The predictor variable indicating different groups. |
square |
Whether return a squared value of regression coefficient. |
Value
A numeric scalar of (squared) regression coefficient of the variance on the started log of mean.
Author(s)
Yilun Zhang, David Rocke
See Also
tran1, tran.est, limma.trans.running
Examples
1 2 3 | data(count.data)
data(condition)
tran.reg(0.3, count.data, condition, square = FALSE)
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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