Description Usage Arguments Value
View source: R/PseudoMarkerFinder.R
This function uses ANOVA to look for unique gene expression in each possible doublet cluster.
1 | PseudoMarkerFinder(groups, redu_data2, full_data2, min_uniq = 4, log_file_name)
|
groups |
Processed groups file from CleanUpInput. |
redu_data2 |
Processed data from CleanUpInput (or RemoveCellCycle) path, automatically written. |
full_data2 |
cleaned full expression matrix from CleanUpInput. |
min_uniq |
minimum number of unique genes required for a cluster to be rescued |
log_file_name |
used for saving run notes to log file |
new_table - non-doublet clusters, as determined by the "Remove" and "Rescue" steps.
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