Files in lycium0605/rLCLAE
Implement Low Coverage Local Ancestry Estimation in R
.DS_Store
.Rbuildignore
.gitignore
DESCRIPTION
NAMESPACE
R/.Rapp.history
R/RcppExports.R
R/ancestimate.R
R/ancestimate_drop_zero.R
R/ancestimate_origin.R
R/ancestimate_output_middle.R
R/ancfreq.R
R/ancgen.R
R/anclik.R
R/anctract.R
R/calltotract.R
R/datacheck.R
R/filtbaboon1b.R
R/prep.R
R/rLCLAE_pip.R
README.Rmd
README.md
man/anccall.Rd
man/anccall_c.Rd
man/anccall_c_int.Rd
man/anccall_c_nozero.Rd
man/anccall_c_nozero_int.Rd
man/anccall_c_ori.Rd
man/anccall_c_test.Rd
man/anccall_check_int.Rd
man/anccall_check_ori.Rd
man/anccall_hap_c.Rd
man/anccall_nozero.Rd
man/ancfreq.Rd
man/ancfreq_c.Rd
man/ancfreq_merge.Rd
man/ancgen.Rd
man/anclik.Rd
man/anclik_c.Rd
man/anctract.Rd
man/anctract_c.Rd
man/datacheck.Rd
man/filt1_dip.Rd
man/filt1_hap.Rd
man/freqsum.Rd
man/genolik.Rd
man/get_chrlist.Rd
man/get_genolik.Rd
man/get_genolik_c.Rd
man/get_genolik_extended_c.Rd
man/getmode.Rd
man/gettract.Rd
man/glpow.Rd
man/inputcheck.Rd
man/mergefreq.Rd
man/preprocess.Rd
man/rLCLAE.Rd
rLCLAE.Rproj
src/.gitignore
src/RcppExports.cpp
src/ancestimate.cpp
src/ancestimate_drop_zero.cpp
src/ancestimate_drop_zero_int.cpp
src/ancestimate_hap.cpp
src/ancestimate_int.cpp
src/ancestimate_ori.cpp
src/ancestimate_test.cpp
src/ancfreq.cpp
src/anclik.cpp
src/anctract_c.cpp
src/code.cpp
src/filt1.cpp
src/genolik.cpp
src/get_genolik.cpp
src/get_genolik_gp.cpp
vignettes/.gitignore
vignettes/my-vignette.Rmd
