anccall_c: anccall_c: Generating ancestry call along the chromosome

In lycium0605/rLCLAE: Implement Low Coverage Local Ancestry Estimation in R

anccall_c: Generating ancestry call along the chromosome

Description

anccall_c: Generating ancestry call along the chromosome

Usage

anccall_c(
  deltaf,
  window,
  SMAX,
  anclikdir,
  output,
  chrom,
  indiv,
  mode,
  n,
  round1,
  round2,
  round3,
  zero_value
)

Arguments

deltaf	The cut-off for minimum delta f between two reference populations
window	Size of the sliding window
SMAX	The number of all snp sites
anclikdir	the dir to anclik file
output	the dir of the output ancfreq file

lycium0605/rLCLAE documentation built on Aug. 28, 2024, 11:35 p.m.