my_readJASPARMatrix: Read JASPAR file-format.
In mPloenzke/learnMotifs: Learn Nucleotide Motifs via Convolutions
Description
Usage
Arguments
Value
Author(s)
Description
Reads in JASPAR format motifs. Slight modification of the original function available in the TFBSTools package (https://github.com/ge11232002/TFBSTools).
Usage
1
my_readJASPARMatrix(fn, type = c("individual", "all"))
Arguments
fn
Filename containing JASPAR-formatted PFMs
type
Does the file contain 'individual' PFMs or a list ('all')?
Value
List of PFM motifs.
Author(s)
Matthew Ploenzke, ploenzke@g.harvard.edu
mPloenzke/learnMotifs documentation built on May 27, 2019, 11:55 a.m.
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Description Usage Arguments Value Author(s)
Description
Reads in JASPAR format motifs. Slight modification of the original function available in the TFBSTools package (https://github.com/ge11232002/TFBSTools).
Usage
1 | my_readJASPARMatrix(fn, type = c("individual", "all"))
|
Arguments
fn |
Filename containing JASPAR-formatted PFMs |
type |
Does the file contain |
Value
List of PFM motifs.
Author(s)
Matthew Ploenzke, ploenzke@g.harvard.edu
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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