Man pages for magrichard/dmprocr
A R package that performs differential methylation profiles clustering
| compute_gene_meth_profile | compute_gene_meth_profile |
| compute_indiv_dm_table | Compute differential mehylation table for each probe... |
| compute_pop_dm_table | Compute differential mehylation table for each probe... |
| dmDistance | dmDistance |
| dmRandomDataset | dmRandomDataset |
| dmTable | dmTable |
| fad_RNAseq_diffAnalysis | Perform a Quick differential analysis of RNAseq data. |
| from_big_to_profile | from_big_to_profile |
| generate_fakestudy | Generate simulated dataset for dmprocr package. |
| get_probe_names | get_probe_names |
| getProfileListID | getProfileListID |
| interpolate_gene | interpolate_gene |
| noCNV_diffAnalysis | Calculate differential expression on a subset of patient. |
| plot_meth_profile | plot_meth_profile |
| plot_trscr_meth_analysis | Plot transcriptome and methylome co-analyse |
| RNAseq_cnv_reg | Perform linear regression on expression and CNV data. |
| RNAseq_diffAnalysis | Perform differential analysis of RNAseq data. |
| RNAseq_normalization | Normalize RNAseq data according to DESeq2 method. |
| select_candidates | Generate a candidate table |
| trscr_meth_analysis | Analyse transcriptome and methylome study |
