View source: R/meth_analysis.R
dmTable | R Documentation |
Generate differential methylation data table from beta values. It basically extract all tumorous samples and controls. Then it computes the difference between each tumorous and the mean of control.
dmTable(data, tested_samples, reference_samples)
data |
A matrix of row methylation data with TCGA sample ids as column names and probes ids as row names. |
tested_samples |
a vector of ids corresmasking to tumoral samples. |
reference_samples |
a vector of ids corresmasking to control samples. |
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