dmTable: dmTable
In magrichard/dmprocr: A R package that performs differential methylation profiles clustering
View source: R/meth_analysis.R
dmTable R Documentation
dmTable
Description
Generate differential methylation data table from beta values. It basically extract all tumorous samples and controls. Then it computes the difference between each tumorous and the mean of control.
Usage
dmTable(data, tested_samples, reference_samples)
Arguments
data
A matrix of row methylation data with TCGA sample ids as column names and probes ids as row names.
tested_samples
a vector of ids corresmasking to tumoral samples.
reference_samples
a vector of ids corresmasking to control samples.
magrichard/dmprocr documentation built on July 21, 2023, 11:01 p.m.
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View source: R/meth_analysis.R
| dmTable | R Documentation |
dmTable
Description
Generate differential methylation data table from beta values. It basically extract all tumorous samples and controls. Then it computes the difference between each tumorous and the mean of control.
Usage
dmTable(data, tested_samples, reference_samples)
Arguments
data |
A matrix of row methylation data with TCGA sample ids as column names and probes ids as row names. |
tested_samples |
a vector of ids corresmasking to tumoral samples. |
reference_samples |
a vector of ids corresmasking to control samples. |
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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