maia-sh/pubmedparser: Fetch and Parse PubMed Records

The `pubmedparser` package extends the [rentrez](https://github.com/ropensci/rentrez) for batch downloading [PubMed](https://www.ncbi.nlm.nih.gov/pubmed/) records using [NCBI E-Utilities](https://www.ncbi.nlm.nih.gov/books/NBK25497/). It allows the user to batch dois, query NCBI Eutils in batches, and download the resulting PubMed records. The `pubmedparser` package uses [xml2](https://github.com/r-lib/xml2) to parse [PubMed XML](https://www.nlm.nih.gov/bsd/licensee/elements_descriptions.html) into a tidy format.

Getting started

Package details

AuthorMaia Salholz-Hillel
MaintainerMaia Salholz-Hillel <maia.salholz-hillel@charite.de>
LicenseWhat license is it under?
Version0.1.0
Package repositoryView on GitHub
Installation Install the latest version of this package by entering the following in R:
install.packages("remotes")
remotes::install_github("maia-sh/pubmedparser")
maia-sh/pubmedparser documentation built on Feb. 18, 2021, 11:44 a.m.