View source: R/extract_datatype.R
Extract specified datatype from PubMed xml into csv
1 2 3 4 5 6 7 8 | extract_datatype(
datatype,
nodes,
file_name = "pubmed",
suffix = NULL,
dir = here::here(),
quiet = FALSE
)
|
datatype |
Type of data to extract from xml for which there is a corresponding "pubmed_" function ("table", "abstract", "databanks", "authors", "mesh", "keywords", "pubtypes") |
nodes |
Article node set |
file_name |
Root for file names. Defaults to "pubmed". |
suffix |
Suffix for file names. For example, record numbers. Defaults to NULL. |
dir |
Directory for saving files. Defaults to project root ( |
quiet |
Whether to silence messages in console. Defaults to FALSE. |
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